Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SO_0497Serine/threonine protein kinase. (653 aa)    
Predicted Functional Partners:
SO_4539
Extracellular peptidase family S8; Belongs to the peptidase S8 family.
 
 
 0.803
SO_3124
Dual specificity protein-tyrosine phosphatase.
  
  
 0.788
SO_0404
Zinc dependent metalloprotease domain lipoprotein.
  
     0.775
SO_0939
Split-soret diheme cytochrome c.
  
     0.771
SO_1505
Proton:peptide symporter POT family.
  
     0.768
SO_2930
Bifunctional pectinolytic enzyme/cytochrome c.
  
    0.750
mtrB
Extracellular iron oxide respiratory system outer membrane component MtrB.
  
     0.743
SO_0719
TonB-dependent hemoprotein receptor.
  
     0.739
cyaC
Adenylate cyclase CyaC.
 
   
 0.719
SO_4505
Formate dehydrogenase associated protein of unknown function DUF3506.
  
     0.709
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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