STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_0502Transcriptional regulator ArsR family. (111 aa)    
Predicted Functional Partners:
arsP
Permease of unknown function DUF318 ArsP.
 
  
 0.780
yifB
ATP-dependent serine peptidase S16 family YifB.
   
    0.608
SO_0678
Mu phage uncharacterized protein.
   
    0.608
arsC2
Thioredoxin-coupled cytoplasmic arsenate reductase ArsC2; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.585
SO_0534
Arsenate permease ACR3 family.
 
  
 0.463
arsC
Glutaredoxin-dependent arsenate reductase ArsC.
 
  
 0.435
azr
NADPH-dependent azoreductase Azr.
 
  
 0.406
nhaD
Sodium:proton antiporter NhaD.
  
  
 0.405
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.