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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsPPermease of unknown function DUF318 ArsP. (358 aa)    
Predicted Functional Partners:
SO_4825
Redox-active disulfide protein.
 
   
 0.932
arsR
Arsenite-sensing transcriptional repressor ArsR.
 
   
 0.817
arsC
Glutaredoxin-dependent arsenate reductase ArsC.
     
 0.799
SO_0732
Thioredoxin-like protein.
  
  
 0.794
SO_0536
Redox-active disulfide protein 2.
 
   
 0.785
corC
Magnesium and cobalt efflux protein CorC.
      
 0.785
SO_0502
Transcriptional regulator ArsR family.
 
  
 0.780
pstA
ABC-type high affinity phosphate uptake system permease component PstA.
   
  
 0.750
zntR
Zinc and cadmium (II) responsive transcriptional activator ZntR.
     
 0.724
pstB2
ABC-type phosphate uptake system permease ATPase component PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
   
  
 0.718
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.