STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arsRArsenite-sensing transcriptional repressor ArsR. (114 aa)    
Predicted Functional Partners:
arsC
Glutaredoxin-dependent arsenate reductase ArsC.
  
  
 0.924
arsC2
Thioredoxin-coupled cytoplasmic arsenate reductase ArsC2; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
 0.918
yciI
Protein of unknown function YciI.
      
 0.868
arsP
Permease of unknown function DUF318 ArsP.
 
   
 0.860
SO_4825
Redox-active disulfide protein.
 
   
 0.841
SO_3771
Inorganic phosphate transporter PiT family.
      
 0.806
pitB
Metal ion-phosphate:proton symporter PitB.
      
 0.799
SO_0534
Arsenate permease ACR3 family.
  
  
 0.773
pgpA
Phosphatidylglycerophosphatase A PgpA; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
      
 0.690
SO_0535
Permease of unknown function DUF318.
 
  
 0.685
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.