STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsC2Thioredoxin-coupled cytoplasmic arsenate reductase ArsC2; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (171 aa)    
Predicted Functional Partners:
SO_0534
Arsenate permease ACR3 family.
  
 0.986
arsR
Arsenite-sensing transcriptional repressor ArsR.
 
  
 0.916
arsC
Glutaredoxin-dependent arsenate reductase ArsC.
 
  
 0.873
SO_0535
Permease of unknown function DUF318.
 
  
 0.709
SO_0536
Redox-active disulfide protein 2.
 
  
 0.704
SO_0502
Transcriptional regulator ArsR family.
 
  
 0.585
pyrF
Orotidine 5`-phosphate decarboxylase PyrF; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
 
      0.523
trxC
Thioredoxin 2 TrxC; Belongs to the thioredoxin family.
  
 
 0.496
SO_0539
Transport protein MFS superfamily.
  
  
 0.495
SO_0732
Thioredoxin-like protein.
  
 
 0.474
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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