STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_0637Toxin-antitoxin system antidote Rhh family. (91 aa)    
Predicted Functional Partners:
SO_0636
Toxin-antitoxin system toxin GNAT family.
 
    0.963
SO_3831
Acteyltransferase GNAT family.
  
   0.637
SO_2849
Acteyltransferase GNAT family.
 
   0.604
SO_0076
Outer membrane morn variant repeat-containing protein.
  
     0.584
SO_0183
Acteyltransferase GNAT family.
  
   0.542
SO_1374
Acteyltransferase GNAT family.
  
   0.541
SO_0877
Acteyltransferase GNAT family.
  
   0.534
SO_1614
Acteyltransferase GNAT family.
  
   0.534
SO_3328
Acteyltransferase GNAT family.
  
   0.534
SO_0920
Acteyltransferase GNAT family.
  
   0.533
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.