Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ggtBGamma-glutamyltransferase GgtB. (570 aa)    
Predicted Functional Partners:
gshB
ATP-dependent glutathione synthetase GshB.
    
 0.925
gor
Glutathione-disulfide reductase Gor.
     
 0.923
ggtA
Gamma-glutamyltransferase GgtA.
  
  
 
0.922
gshA
Glutamate--cysteine ligase GshA; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
    
 0.910
pepB
Aminopeptidase PepB; Probably plays an important role in intracellular peptide degradation.
     
 0.907
pepA1
Periplasmic leucyl metal-dependent aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides (By similarity).
     
 0.907
pepD
Aminoacyl-histidine/glycine-aspartate dipeptidase PepD.
     
 0.907
pepA
Cytoplasmic leucine metal-dependent aminopeptidase PepA; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides (By similarity).
     
 0.907
SO_1563
Cytoplasmic glutathione peroxidase.
   
 
 0.906
SO_3349
Periplasmic glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.906
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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