Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
aaiDAcyl-homoserine lactone acylase AaiD. (855 aa)    
Predicted Functional Partners:
phyH
phytanoyl-CoA dioxygenase PhyH.
  
   
 0.964
SO_2290
Rhodanese domain protein UPF0176 family; Belongs to the UPF0176 family.
     
 0.923
SO_4680
CDP-glycerol glycerophosphotransferase family protein.
      
 0.889
wbqC
Putative glycine transferase in O-antigen biosynthesis cluster WbqC.
   
  
 0.811
mxdA
Diguanylate cyclase-like protein MxdA.
      
 0.667
SO_2930
Bifunctional pectinolytic enzyme/cytochrome c.
  
     0.623
SO_0497
Serine/threonine protein kinase.
  
     0.552
fliP
Flagellar export protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
      
 0.514
SO_3049
Aldehyde oxidase / xanthine dehydrogenase family FeS subunit.
   
    0.511
yjjX
Inosine/xanthosine triphosphatase YjjX; Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA/RNA precursor pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.
 
     0.508
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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