Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SO_0920Acteyltransferase GNAT family. (147 aa)    
Predicted Functional Partners:
SO_0018
MOSC domain protein.
  
    0.561
accADCB
acetyl-CoA carboxylase multifunctional enzyme AccADCB.
 
 
   0.552
SO_0637
Toxin-antitoxin system antidote Rhh family.
   
 
 0.535
SO_3772
SH3 domain protein.
   
    0.511
SO_0921
Uncharacterized protein.
       0.476
SO_0673
Mu phage uncharacterized protein.
   
    0.429
SO_0365
Transport protein MFS superfamily.
  
   
 0.417
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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