STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rlmG23S rRNA (guanine1835-N2)-methyltransferase RlmG; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. (377 aa)    
Predicted Functional Partners:
obgE
50S ribosome assembly GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
   
  
 0.788
bolA
Global transcriptional regulator BolA; Belongs to the BolA/IbaG family.
     
 0.596
nusG
Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.
  
  
 0.580
SO_1098
2OG-Fe(II) oxygenase family protein.
       0.579
bipA
GTP-binding protein BipA.
  
  
 0.553
rpoB
DNA-directed RNA polymerase beta subunit RpoB; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
    0.530
fklB
Peptidyl-prolyl cis-trans isomerase FklB.
   
  
 0.527
fklB-4
Peptidyl-prolyl cis-trans isomerase FklB.
   
  
 0.524
yhiR
Exogenous DNA processing protein YhiR; Specifically methylates the adenine in position 2030 of 23S rRNA.
      
 0.523
fklB-2
Peptidyl-prolyl cis-trans isomerase FklB.
      
 0.511
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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