Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SO_0673 | SO_0908 | SO_0673 | SO_0908 | Mu phage uncharacterized protein. | Ankyrin domain protein. | 0.681 |
SO_0673 | SO_1098 | SO_0673 | SO_1098 | Mu phage uncharacterized protein. | 2OG-Fe(II) oxygenase family protein. | 0.566 |
SO_0673 | SO_1939 | SO_0673 | SO_1939 | Mu phage uncharacterized protein. | Uncharacterized protein. | 0.721 |
SO_0673 | SO_4174 | SO_0673 | SO_4174 | Mu phage uncharacterized protein. | dTDP-4-dehydrorhamnose reductase family; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.437 |
SO_0908 | SO_0673 | SO_0908 | SO_0673 | Ankyrin domain protein. | Mu phage uncharacterized protein. | 0.681 |
SO_0908 | SO_1098 | SO_0908 | SO_1098 | Ankyrin domain protein. | 2OG-Fe(II) oxygenase family protein. | 0.532 |
SO_0908 | SO_1939 | SO_0908 | SO_1939 | Ankyrin domain protein. | Uncharacterized protein. | 0.749 |
SO_1098 | SO_0673 | SO_1098 | SO_0673 | 2OG-Fe(II) oxygenase family protein. | Mu phage uncharacterized protein. | 0.566 |
SO_1098 | SO_0908 | SO_1098 | SO_0908 | 2OG-Fe(II) oxygenase family protein. | Ankyrin domain protein. | 0.532 |
SO_1098 | SO_1939 | SO_1098 | SO_1939 | 2OG-Fe(II) oxygenase family protein. | Uncharacterized protein. | 0.499 |
SO_1098 | SO_3127 | SO_1098 | SO_3127 | 2OG-Fe(II) oxygenase family protein. | Multifunctional transcriptional regulator of DNA repair AraC family/ DNA glycosylase / 8-oxoguanine DNA glycosylase. | 0.527 |
SO_1098 | SO_4174 | SO_1098 | SO_4174 | 2OG-Fe(II) oxygenase family protein. | dTDP-4-dehydrorhamnose reductase family; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.411 |
SO_1098 | SO_4295 | SO_1098 | SO_4295 | 2OG-Fe(II) oxygenase family protein. | Quinone oxidoreductase family protein. | 0.402 |
SO_1098 | bolA | SO_1098 | SO_1099 | 2OG-Fe(II) oxygenase family protein. | Global transcriptional regulator BolA; Belongs to the BolA/IbaG family. | 0.552 |
SO_1098 | ogt | SO_1098 | SO_3126 | 2OG-Fe(II) oxygenase family protein. | Constitutive O6-methylguanine-DNA methyltransferase II Ogt; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.501 |
SO_1098 | panE | SO_1098 | SO_3817 | 2OG-Fe(II) oxygenase family protein. | 2-dehydropantoate 2-reductase PanE; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 0.683 |
SO_1098 | rlmG | SO_1098 | SO_1097 | 2OG-Fe(II) oxygenase family protein. | 23S rRNA (guanine1835-N2)-methyltransferase RlmG; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.484 |
SO_1939 | SO_0673 | SO_1939 | SO_0673 | Uncharacterized protein. | Mu phage uncharacterized protein. | 0.721 |
SO_1939 | SO_0908 | SO_1939 | SO_0908 | Uncharacterized protein. | Ankyrin domain protein. | 0.749 |
SO_1939 | SO_1098 | SO_1939 | SO_1098 | Uncharacterized protein. | 2OG-Fe(II) oxygenase family protein. | 0.499 |
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