holD protein (Shewanella oneidensis) - STRING interaction network

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[Homology]

Score

holD

DNA polymerase III psi subunit HolD. (116 aa)

Predicted Functional Partners:

kdpD

0.938

holC

0.886

dnaX

0.874

holB

0.871

dnaE

0.864

holA

0.856

yrbG

0.785

rimI

0.655

dnaN

0.629

SO_4527

0.602

Your Current Organism:

Shewanella oneidensis

NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SO_4527	holD	SO_4527	SO_1159	10 TMS drug/metabolite efflux pump (DME) family.	DNA polymerase III psi subunit HolD.	0.602
SO_4527	yrbG	SO_4527	SO_0354	10 TMS drug/metabolite efflux pump (DME) family.	Sodium:calcium antiporter CaCA family YrbG.	0.442
dnaE	dnaN	SO_1644	SO_0009	DNA polymerase III alpha subunit DnaE.	DNA polymerase III beta subunit DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	0.997
dnaE	dnaX	SO_1644	SO_2013	DNA polymerase III alpha subunit DnaE.	DNA polymerase III gamma and tau subunits DnaX.	0.998
dnaE	holA	SO_1644	SO_1172	DNA polymerase III alpha subunit DnaE.	DNA polymerase III delta subunit HolA.	0.995
dnaE	holB	SO_1644	SO_2612	DNA polymerase III alpha subunit DnaE.	DNA polymerase III delta' subunit HolB.	0.995
dnaE	holC	SO_1644	SO_3423	DNA polymerase III alpha subunit DnaE.	DNA polymerase III chi subunit HolC.	0.995
dnaE	holD	SO_1644	SO_1159	DNA polymerase III alpha subunit DnaE.	DNA polymerase III psi subunit HolD.	0.864
dnaN	dnaE	SO_0009	SO_1644	DNA polymerase III beta subunit DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	DNA polymerase III alpha subunit DnaE.	0.997
dnaN	dnaX	SO_0009	SO_2013	DNA polymerase III beta subunit DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	DNA polymerase III gamma and tau subunits DnaX.	0.998
dnaN	holA	SO_0009	SO_1172	DNA polymerase III beta subunit DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	DNA polymerase III delta subunit HolA.	0.996
dnaN	holB	SO_0009	SO_2612	DNA polymerase III beta subunit DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	DNA polymerase III delta' subunit HolB.	0.996
dnaN	holC	SO_0009	SO_3423	DNA polymerase III beta subunit DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	DNA polymerase III chi subunit HolC.	0.983
dnaN	holD	SO_0009	SO_1159	DNA polymerase III beta subunit DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	DNA polymerase III psi subunit HolD.	0.629
dnaX	dnaE	SO_2013	SO_1644	DNA polymerase III gamma and tau subunits DnaX.	DNA polymerase III alpha subunit DnaE.	0.998
dnaX	dnaN	SO_2013	SO_0009	DNA polymerase III gamma and tau subunits DnaX.	DNA polymerase III beta subunit DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	0.998
dnaX	holA	SO_2013	SO_1172	DNA polymerase III gamma and tau subunits DnaX.	DNA polymerase III delta subunit HolA.	0.996
dnaX	holB	SO_2013	SO_2612	DNA polymerase III gamma and tau subunits DnaX.	DNA polymerase III delta' subunit HolB.	0.998
dnaX	holC	SO_2013	SO_3423	DNA polymerase III gamma and tau subunits DnaX.	DNA polymerase III chi subunit HolC.	0.994
dnaX	holD	SO_2013	SO_1159	DNA polymerase III gamma and tau subunits DnaX.	DNA polymerase III psi subunit HolD.	0.874

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