Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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SO_1227c-di-GMP-binding protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. (130 aa)    
Predicted Functional Partners:
rdgC
Putative exonuclease RdgC; May be involved in recombination; Belongs to the RdgC family.
      
 0.806
cheR-3
Chemotaxis signal transduction system MCP methyltransferase CheR.
  
 
   0.740
cheW-4
Chemotaxis signal transduction system adaptor protein CheW.
  
     0.723
cheR
Chemotaxis signal transduction system MCP methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
    
   0.696
cheR-2
Chemotaxis signal transduction system MCP methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
    
   0.696
mshO
MshA minor pilin protein MshO.
  
     0.651
mshJ
MSHA biogenesis protein MshJ.
  
     0.624
mshQ
MshA pili-associated adhesin MshQ.
  
     0.544
ldh
Leucine dehydrogenase Ldh.
  
    0.540
mshD
MshA minor pilin protein MshD.
  
    0.526
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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