STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
torAtrimethylamine-N-oxide reductase TorA; Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions. (829 aa)    
Predicted Functional Partners:
torD
TorA-specific chaperone TorD; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily.
 
 0.999
torC
Trimethylamine N-oxide reductase membrane anchored cytochrome c component TorC; Belongs to the TorC/TorY family.
 
 0.999
torE
Transmembrane component of the trimethylamine N-oxide reductase system TorE.
  
  
 0.937
torT
Periplasmic component of the TorRS TMAO sensory system TorT.
  
  
 0.933
torS
Histidine kinase; TMAO-responsive two component signal transduction system hybrid histidine kinase/response regulator TorS.
  
 
 0.926
fdnG
Nitrate-inducible formate dehydrogenase molybdopterin-binding subunit FdnG; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.851
fdnH
Nitrate-inducible formate dehydrogenase iron-sulfur subunit FdnH; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.
 
 0.843
torR
TMAO-responsive two component signal transduction system response regulator TorR.
  
   
 0.830
SO_4362
Extracellular oxidoreductase chaperone protein.
 
 
 0.804
SO_3659
Thiol:disulfide interchange protein.
   
  
 0.788
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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