Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
oxyRTranscriptional regulator of oxidative stress OxyR; Belongs to the LysR transcriptional regulatory family. (304 aa)    
Predicted Functional Partners:
katB
Catalase HPII KatB; Belongs to the catalase family.
     
 0.939
ahpC
Alkyl hydroperoxide reductase peroxiredoxin component AhpC; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
 
  
 0.822
ahpF
Alkyl hydroperoxide reductase flavoprotein component AhpF.
     
 0.804
katG-2
Bifunctional catalase/peroxidase HPI KatG; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.802
ohrR
Hydroperoxide resistance transcriptional regulator OhrR.
      
 0.801
trxC
Thioredoxin 2 TrxC; Belongs to the thioredoxin family.
      
 0.800
SO_1916
DMSO-responsive transcriptional activator of efflux pump LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.756
SO_0295
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.746
SO_4524
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.737
SO_3363
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.732
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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