Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SO_1059 | SO_1117 | SO_1059 | SO_1117 | Periplasmic alanyl aminopeptidase. | Cytoplasmic leucyl metal-dependent aminopeptidase. | 0.912 |
SO_1059 | ggtA | SO_1059 | SO_1952 | Periplasmic alanyl aminopeptidase. | Gamma-glutamyltransferase GgtA. | 0.901 |
SO_1059 | ggtB | SO_1059 | SO_0741 | Periplasmic alanyl aminopeptidase. | Gamma-glutamyltransferase GgtB. | 0.901 |
SO_1059 | gshA | SO_1059 | SO_3559 | Periplasmic alanyl aminopeptidase. | Glutamate--cysteine ligase GshA; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.904 |
SO_1059 | gshB | SO_1059 | SO_0831 | Periplasmic alanyl aminopeptidase. | ATP-dependent glutathione synthetase GshB. | 0.904 |
SO_1059 | pepA | SO_1059 | SO_1368 | Periplasmic alanyl aminopeptidase. | Cytoplasmic leucine metal-dependent aminopeptidase PepA; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides (By similarity). | 0.912 |
SO_1059 | pepA1 | SO_1059 | SO_0959 | Periplasmic alanyl aminopeptidase. | Periplasmic leucyl metal-dependent aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides (By similarity). | 0.912 |
SO_1059 | pepB | SO_1059 | SO_0876 | Periplasmic alanyl aminopeptidase. | Aminopeptidase PepB; Probably plays an important role in intracellular peptide degradation. | 0.912 |
SO_1059 | pepD | SO_1059 | SO_1115 | Periplasmic alanyl aminopeptidase. | Aminoacyl-histidine/glycine-aspartate dipeptidase PepD. | 0.906 |
SO_1059 | pepN | SO_1059 | SO_2600 | Periplasmic alanyl aminopeptidase. | Alanyl aminopeptidase PepN. | 0.911 |
SO_1117 | SO_1059 | SO_1117 | SO_1059 | Cytoplasmic leucyl metal-dependent aminopeptidase. | Periplasmic alanyl aminopeptidase. | 0.912 |
SO_1117 | ggtA | SO_1117 | SO_1952 | Cytoplasmic leucyl metal-dependent aminopeptidase. | Gamma-glutamyltransferase GgtA. | 0.904 |
SO_1117 | ggtB | SO_1117 | SO_0741 | Cytoplasmic leucyl metal-dependent aminopeptidase. | Gamma-glutamyltransferase GgtB. | 0.904 |
SO_1117 | gshA | SO_1117 | SO_3559 | Cytoplasmic leucyl metal-dependent aminopeptidase. | Glutamate--cysteine ligase GshA; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.902 |
SO_1117 | gshB | SO_1117 | SO_0831 | Cytoplasmic leucyl metal-dependent aminopeptidase. | ATP-dependent glutathione synthetase GshB. | 0.917 |
SO_1117 | pepA | SO_1117 | SO_1368 | Cytoplasmic leucyl metal-dependent aminopeptidase. | Cytoplasmic leucine metal-dependent aminopeptidase PepA; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides (By similarity). | 0.929 |
SO_1117 | pepA1 | SO_1117 | SO_0959 | Cytoplasmic leucyl metal-dependent aminopeptidase. | Periplasmic leucyl metal-dependent aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides (By similarity). | 0.931 |
SO_1117 | pepB | SO_1117 | SO_0876 | Cytoplasmic leucyl metal-dependent aminopeptidase. | Aminopeptidase PepB; Probably plays an important role in intracellular peptide degradation. | 0.932 |
SO_1117 | pepD | SO_1117 | SO_1115 | Cytoplasmic leucyl metal-dependent aminopeptidase. | Aminoacyl-histidine/glycine-aspartate dipeptidase PepD. | 0.951 |
SO_1117 | pepN | SO_1117 | SO_2600 | Cytoplasmic leucyl metal-dependent aminopeptidase. | Alanyl aminopeptidase PepN. | 0.913 |
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