STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_1385Chemotaxis signal transduction system methyl accepting sensory transducer with PAS sensory domain. (520 aa)    
Predicted Functional Partners:
cheV
Chemotaxis signal transduction system response regulator CheV.
 
 0.997
cheV-3
Chemotaxis signal transduction system response regulator CheV.
 
 0.997
cheV-2
Chemotaxis signal transduction system response regulator CheV.
 
 0.996
cheA-2
Chemotaxis signal transduction system histidine kinase CheA.
 
 0.993
cheA
Chemotaxis signal transduction system histidine kinase CheA.
 
 0.978
cheW-3
Chemotaxis signal transduction system adaptor protein CheW.
 
 0.963
cheR-3
Chemotaxis signal transduction system MCP methyltransferase CheR.
 
 0.947
cheW-2
Chemotaxis signal transduction system adaptor protein CheW.
 
 0.944
cheB-3
Chemotaxis signal transduction system response regulator with glutamate methylesterase domain CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 0.943
SO_0859
Histidine kinase; Two component signal transduction system hybrid histidine kinase/response regulator with PAS sensory domain.
 
 
 0.942
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.