Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SO_1413 | SO_1414 | SO_1413 | SO_1414 | Flavocytochrome c heme submit. | Flavocytochrome c flavin subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.795 |
| SO_1413 | dhc | SO_1413 | SO_4485 | Flavocytochrome c heme submit. | Diheme cytochrome c Dhc. | 0.739 |
| SO_1413 | dnaK | SO_1413 | SO_1126 | Flavocytochrome c heme submit. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.835 |
| SO_1413 | grpE | SO_1413 | SO_1524 | Flavocytochrome c heme submit. | Heat shock nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Sev [...] | 0.757 |
| SO_1413 | hscA | SO_1413 | SO_2268 | Flavocytochrome c heme submit. | Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | 0.835 |
| SO_1413 | htpG | SO_1413 | SO_2016 | Flavocytochrome c heme submit. | Heat shock chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.859 |
| SO_1413 | rplK | SO_1413 | SO_0220 | Flavocytochrome c heme submit. | 50S ribosomal protein L11 RplK; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.712 |
| SO_1413 | rplO | SO_1413 | SO_0250 | Flavocytochrome c heme submit. | 50S ribosomal protein L15 RplO; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.713 |
| SO_1413 | rplQ | SO_1413 | SO_0257 | Flavocytochrome c heme submit. | 50S ribosomal protein L17 RplQ. | 0.727 |
| SO_1413 | yegD | SO_1413 | SO_2189 | Flavocytochrome c heme submit. | Hsp70 family protein YegD. | 0.835 |
| SO_1414 | SO_1413 | SO_1414 | SO_1413 | Flavocytochrome c flavin subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | Flavocytochrome c heme submit. | 0.795 |
| dhc | SO_1413 | SO_4485 | SO_1413 | Diheme cytochrome c Dhc. | Flavocytochrome c heme submit. | 0.739 |
| dnaK | SO_1413 | SO_1126 | SO_1413 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Flavocytochrome c heme submit. | 0.835 |
| dnaK | grpE | SO_1126 | SO_1524 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Heat shock nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Sev [...] | 0.998 |
| dnaK | htpG | SO_1126 | SO_2016 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Heat shock chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.994 |
| dnaK | rplK | SO_1126 | SO_0220 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 50S ribosomal protein L11 RplK; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.475 |
| grpE | SO_1413 | SO_1524 | SO_1413 | Heat shock nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Sev [...] | Flavocytochrome c heme submit. | 0.757 |
| grpE | dnaK | SO_1524 | SO_1126 | Heat shock nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Sev [...] | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.998 |
| grpE | hscA | SO_1524 | SO_2268 | Heat shock nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Sev [...] | Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | 0.974 |
| grpE | htpG | SO_1524 | SO_2016 | Heat shock nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Sev [...] | Heat shock chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.936 |
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