STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
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Coexpression
Experiments
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[Homology]
Score
adhBAlcohol dehydrogenase II AdhB. (382 aa)    
Predicted Functional Partners:
frmA
S-(hydroxymethyl)glutathione dehydrogenase FrmA; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.969
exaC
NAD+-dependent acetaldehyde dehydrogenase ExaC; Belongs to the aldehyde dehydrogenase family.
 
 0.945
adhE
Aldehyde-alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
0.940
tusD
tRNA 2-thiouridine synthesizing protein D subunit TusD.
      
 0.801
tusC
tRNA 2-thiouridine synthesizing protein C subunit TusC; Belongs to the DsrF/TusC family.
      
 0.801
tusB
tRNA 2-thiouridine synthesizing protein B subunit TusB.
      
 0.801
calB
Coniferyl aldehyde dehydrogenase CalB; Belongs to the aldehyde dehydrogenase family.
 
 
 0.683
nqrC-2
Na-translocating NADH-quinone reductase subunit C NqrC; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.
   
  
 0.666
cdd
Cytidine deaminase Cdd; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.
   
  
 0.611
glgA
Glycogen synthase ADP-glucose transglucosylase GlgA.
   
    0.561
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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