Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SO_1506 | SO_1507 | SO_1506 | SO_1507 | Na(+)-coupled multidrug efflux pump VmrA-like protein. | C-terminal Bar domain-containing protein. | 0.447 |
| SO_1506 | SO_1739 | SO_1506 | SO_1739 | Na(+)-coupled multidrug efflux pump VmrA-like protein. | Protein of unknown function DUF1289. | 0.409 |
| SO_1506 | SO_4689 | SO_1506 | SO_4689 | Na(+)-coupled multidrug efflux pump VmrA-like protein. | Membrane protein COG0398 family. | 0.443 |
| SO_1506 | deoT | SO_1506 | SO_2718 | Na(+)-coupled multidrug efflux pump VmrA-like protein. | Nucleoside sugar transporter DeoT. | 0.407 |
| SO_1506 | e4pd | SO_1506 | SO_0931 | Na(+)-coupled multidrug efflux pump VmrA-like protein. | D-erythrose-4-phosphate dehydrogenase E4pd; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | 0.414 |
| SO_1506 | gapA | SO_1506 | SO_0538 | Na(+)-coupled multidrug efflux pump VmrA-like protein. | Glyceraldehyde-3-phosphate dehydrogenase (NAD+) GapA; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.414 |
| SO_1506 | gapA-2 | SO_1506 | SO_2345 | Na(+)-coupled multidrug efflux pump VmrA-like protein. | Glyceraldehyde-3-phosphate dehydrogenase (NAD+) GapA; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.414 |
| SO_1506 | gapB | SO_1506 | SO_2347 | Na(+)-coupled multidrug efflux pump VmrA-like protein. | Glyceraldehyde-3-phosphate dehydrogenase GapB; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.414 |
| SO_1506 | rpsA | SO_1506 | SO_2402 | Na(+)-coupled multidrug efflux pump VmrA-like protein. | Ribosomal protein S1 RpsA; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.515 |
| SO_1507 | SO_1506 | SO_1507 | SO_1506 | C-terminal Bar domain-containing protein. | Na(+)-coupled multidrug efflux pump VmrA-like protein. | 0.447 |
| SO_1739 | SO_1506 | SO_1739 | SO_1506 | Protein of unknown function DUF1289. | Na(+)-coupled multidrug efflux pump VmrA-like protein. | 0.409 |
| SO_4689 | SO_1506 | SO_4689 | SO_1506 | Membrane protein COG0398 family. | Na(+)-coupled multidrug efflux pump VmrA-like protein. | 0.443 |
| deoT | SO_1506 | SO_2718 | SO_1506 | Nucleoside sugar transporter DeoT. | Na(+)-coupled multidrug efflux pump VmrA-like protein. | 0.407 |
| e4pd | SO_1506 | SO_0931 | SO_1506 | D-erythrose-4-phosphate dehydrogenase E4pd; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | Na(+)-coupled multidrug efflux pump VmrA-like protein. | 0.414 |
| e4pd | rpsA | SO_0931 | SO_2402 | D-erythrose-4-phosphate dehydrogenase E4pd; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | Ribosomal protein S1 RpsA; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.532 |
| gapA | SO_1506 | SO_0538 | SO_1506 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+) GapA; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Na(+)-coupled multidrug efflux pump VmrA-like protein. | 0.414 |
| gapA | rpsA | SO_0538 | SO_2402 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+) GapA; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Ribosomal protein S1 RpsA; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.528 |
| gapA-2 | SO_1506 | SO_2345 | SO_1506 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+) GapA; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Na(+)-coupled multidrug efflux pump VmrA-like protein. | 0.414 |
| gapA-2 | gapB | SO_2345 | SO_2347 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+) GapA; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Glyceraldehyde-3-phosphate dehydrogenase GapB; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.423 |
| gapA-2 | rpsA | SO_2345 | SO_2402 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+) GapA; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Ribosomal protein S1 RpsA; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.533 |
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