Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| S | SO_1507 | SO_2971 | SO_1507 | Lambda phage holin S. | C-terminal Bar domain-containing protein. | 0.920 |
| S | glnE | SO_2971 | SO_3760 | Lambda phage holin S. | [glutamate-ammonia-ligase] adenylyltransferase GlnE; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal [...] | 0.473 |
| S | sltY | SO_2971 | SO_2040 | Lambda phage holin S. | Soluble lytic murein transglycosylase SltY. | 0.900 |
| S | ybgF | SO_2971 | SO_2746 | Lambda phage holin S. | TolA energy-transducing system periplasmic component YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.827 |
| SO_1506 | SO_1507 | SO_1506 | SO_1507 | Na(+)-coupled multidrug efflux pump VmrA-like protein. | C-terminal Bar domain-containing protein. | 0.447 |
| SO_1507 | S | SO_1507 | SO_2971 | C-terminal Bar domain-containing protein. | Lambda phage holin S. | 0.920 |
| SO_1507 | SO_1506 | SO_1507 | SO_1506 | C-terminal Bar domain-containing protein. | Na(+)-coupled multidrug efflux pump VmrA-like protein. | 0.447 |
| SO_1507 | SO_1508 | SO_1507 | SO_1508 | C-terminal Bar domain-containing protein. | Glyoxalase family protein. | 0.439 |
| SO_1507 | glnE | SO_1507 | SO_3760 | C-terminal Bar domain-containing protein. | [glutamate-ammonia-ligase] adenylyltransferase GlnE; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal [...] | 0.470 |
| SO_1507 | sltY | SO_1507 | SO_2040 | C-terminal Bar domain-containing protein. | Soluble lytic murein transglycosylase SltY. | 0.900 |
| SO_1507 | ybgF | SO_1507 | SO_2746 | C-terminal Bar domain-containing protein. | TolA energy-transducing system periplasmic component YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.827 |
| SO_1507 | ybjU | SO_1507 | SO_3338 | C-terminal Bar domain-containing protein. | Threonine aldolase YbjU. | 0.400 |
| SO_1508 | SO_1507 | SO_1508 | SO_1507 | Glyoxalase family protein. | C-terminal Bar domain-containing protein. | 0.439 |
| glnE | S | SO_3760 | SO_2971 | [glutamate-ammonia-ligase] adenylyltransferase GlnE; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal [...] | Lambda phage holin S. | 0.473 |
| glnE | SO_1507 | SO_3760 | SO_1507 | [glutamate-ammonia-ligase] adenylyltransferase GlnE; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal [...] | C-terminal Bar domain-containing protein. | 0.470 |
| glnE | ybgF | SO_3760 | SO_2746 | [glutamate-ammonia-ligase] adenylyltransferase GlnE; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal [...] | TolA energy-transducing system periplasmic component YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.423 |
| sltY | S | SO_2040 | SO_2971 | Soluble lytic murein transglycosylase SltY. | Lambda phage holin S. | 0.900 |
| sltY | SO_1507 | SO_2040 | SO_1507 | Soluble lytic murein transglycosylase SltY. | C-terminal Bar domain-containing protein. | 0.900 |
| sltY | ybgF | SO_2040 | SO_2746 | Soluble lytic murein transglycosylase SltY. | TolA energy-transducing system periplasmic component YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.747 |
| ybgF | S | SO_2746 | SO_2971 | TolA energy-transducing system periplasmic component YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | Lambda phage holin S. | 0.827 |
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