Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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Score
gcvATranscriptional activator of glycine metabolism GcvA; Belongs to the LysR transcriptional regulatory family. (303 aa)    
Predicted Functional Partners:
SO_1534
Alpha/beta-hydrolase superfamily protein.
 
    0.818
oxyR
Transcriptional regulator of oxidative stress OxyR; Belongs to the LysR transcriptional regulatory family.
  
   
 0.713
cysB
Transcriptional activator of cys regulon CysB; Belongs to the LysR transcriptional regulatory family.
  
  
 0.709
SO_4542
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
    0.695
ilvY
LysR family transcriptional regulator, positive regulator for ilvC; Acetohydroxybutyrate/acetolactate-responsive transcriptional regulator of isoleucine-valine biosynthesis IlvY; Belongs to the LysR transcriptional regulatory family.
  
   
 0.691
SO_4140
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.690
SO_0989
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.665
SO_1916
DMSO-responsive transcriptional activator of efflux pump LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.638
hmgR
Homogentisate-responsive transcriptional repressor of homogenetisate degradation HmgR; Belongs to the LysR transcriptional regulatory family.
  
  
 0.621
fadR
Transcriptional regulator of fatty acid metabolism FadR; Multifunctional regulator of fatty acid metabolism.
  
  
 0.616
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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