STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ptsGPhosphotransferase system (PTS) glucose-specific IIBC component PtsG. (499 aa)    
Predicted Functional Partners:
crr
Phosphotransferase system (PTS) glucose-specific IIA component Crr.
 0.999
hexB
beta-N-acetylhexosaminidase HexB.
 
  
 0.992
ptsH
Phosphotransferase system (PTS) phosphocarrier protein HPr PtsH.
 
 
 0.984
SO_1389
ROK family protein.
  
 
 0.967
hexA
D-hexose 6-phosphotransferase HexA.
  
 
 0.967
pgi
Glucose-6-phosphate isomerase Pgi.
    
 0.954
pgm
Phosphoglucomutase alpha-D-glucose phosphate-specific Pgm.
    
 0.931
ptsI
Phosphotransferase system (PTS) phosphoenolpyruvate-protein phosphotransferase PtsI; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
  
 0.928
tkt
Transketolase Tkt; Belongs to the transketolase family.
   
 
 0.918
zwf
Glucose-6-phosphate 1-dehydrogenase Zwf; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
    
 0.911
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.