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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galEUDP-glucose 4-epimerase GalE; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (337 aa)    
Predicted Functional Partners:
galK
Galactokinase GalK; Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.997
galU
UTP-glucose-1-phosphate uridylyltransferase GalU.
 
 0.997
galM
Aldose 1-epimerase GalM; Converts alpha-aldose to the beta-anomer.
  
 0.986
wcvB
UDP-glucose dehydrogenase WcvB.
  
 
 0.943
gmhB
DD-heptose 17-bisphosphate phosphatase GmhB.
 
  
 0.896
exaC
NAD+-dependent acetaldehyde dehydrogenase ExaC; Belongs to the aldehyde dehydrogenase family.
   
 
 0.749
calB
Coniferyl aldehyde dehydrogenase CalB; Belongs to the aldehyde dehydrogenase family.
   
 
 0.668
relV
(p)ppGpp synthetase RelV.
      
 0.651
nagK
N-acetylglucosamine kinase NagK.
   
  
 0.580
wcvA
UDP-glucuronate 4-epimerase WcvA.
  
0.566
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.