Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
copACu2+-exporting ATPase CopA. (753 aa)    
Predicted Functional Partners:
SO_1407
Hg(II) uptake system substrate-binding component MerP family.
  
 
 0.884
nrfJ
Periplasmic protein of unknown function NrfJ.
   
    0.694
SO_0728
Protein of unknown function COG1433.
   
  
 0.522
cueR
Copper-responsive transcriptional regulator of copper exporter CueR.
 
  
 0.511
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.494
hlyU
Transcriptional activator HlyU.
 
  
 0.452
SO_0444
Zinc/cadmium-responsive efflux pump.
  
    0.434
fieF
Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
 0.433
ybiT
REG family ATPase YbiT.
  
    0.430
cusA
Copper/silver efflux pump permease component CusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.426
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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