Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SO_0860 | SO_1255 | Two component signal transduction system response regulator with HD domain. | Bifunctional diguanylate cyclase/phosphodiesterase. | 0.666 |
SO_0860 | SO_1695 | Two component signal transduction system response regulator with HD domain. | Diguanylate cyclase with PAS sensory domain. | 0.933 |
SO_1255 | SO_0860 | Bifunctional diguanylate cyclase/phosphodiesterase. | Two component signal transduction system response regulator with HD domain. | 0.666 |
SO_1255 | SO_1387 | Bifunctional diguanylate cyclase/phosphodiesterase. | HD domain protein. | 0.472 |
SO_1255 | SO_1695 | Bifunctional diguanylate cyclase/phosphodiesterase. | Diguanylate cyclase with PAS sensory domain. | 0.823 |
SO_1255 | SO_2039 | Bifunctional diguanylate cyclase/phosphodiesterase. | Signalling protein with EAL domain. | 0.427 |
SO_1255 | SO_2507 | Bifunctional diguanylate cyclase/phosphodiesterase. | Bifunctional diguanylate cyclase/phosphodiesterase. | 0.609 |
SO_1255 | SO_2539 | Bifunctional diguanylate cyclase/phosphodiesterase. | Two component signal transduction system response regulator with cyclic diguanylate phosphodiesterase activity and PAS sensory domain. | 0.541 |
SO_1255 | SO_4003 | Bifunctional diguanylate cyclase/phosphodiesterase. | Metal dependent phosphohydrolase with response regulator receiver modulation. | 0.722 |
SO_1255 | SO_4145 | Bifunctional diguanylate cyclase/phosphodiesterase. | Signalling protein with EAL and C2 domains. | 0.424 |
SO_1255 | SO_4711 | Bifunctional diguanylate cyclase/phosphodiesterase. | Cyclic di-GMP hydrolase. | 0.413 |
SO_1255 | SO_4734 | Bifunctional diguanylate cyclase/phosphodiesterase. | Bifunctional diguanylate cyclase/phosphodiesterase with PAS sensory domain. | 0.756 |
SO_1387 | SO_1255 | HD domain protein. | Bifunctional diguanylate cyclase/phosphodiesterase. | 0.472 |
SO_1387 | SO_1695 | HD domain protein. | Diguanylate cyclase with PAS sensory domain. | 0.921 |
SO_1387 | SO_2039 | HD domain protein. | Signalling protein with EAL domain. | 0.454 |
SO_1387 | SO_2507 | HD domain protein. | Bifunctional diguanylate cyclase/phosphodiesterase. | 0.432 |
SO_1387 | SO_2539 | HD domain protein. | Two component signal transduction system response regulator with cyclic diguanylate phosphodiesterase activity and PAS sensory domain. | 0.403 |
SO_1387 | SO_4734 | HD domain protein. | Bifunctional diguanylate cyclase/phosphodiesterase with PAS sensory domain. | 0.574 |
SO_1695 | SO_0860 | Diguanylate cyclase with PAS sensory domain. | Two component signal transduction system response regulator with HD domain. | 0.933 |
SO_1695 | SO_1255 | Diguanylate cyclase with PAS sensory domain. | Bifunctional diguanylate cyclase/phosphodiesterase. | 0.823 |
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