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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sapDABC-type peptide uptake system ATPase component 1 SapD; Belongs to the ABC transporter superfamily. (335 aa)    
Predicted Functional Partners:
sapC
ABC-type peptide uptake system permease component 2 SapC.
 
 0.999
sapB
ABC-type peptide uptake system permease component 1 SapB.
 
 0.999
sapA
ABC-type peptide uptake system substrate-binding component SapA.
 
 0.999
sapF
ABC-type peptide uptake system ATPase component 2 SapF.
 
 
0.994
modC-2
ABC-type molybdate uptake system ATPase component ModC; Belongs to the ABC transporter superfamily.
 
   
0.915
fbpC
ABC-type Fe3+ uptake system ATPase component FbpC; Belongs to the ABC transporter superfamily.
 
   
0.914
lolD
ABC-type lipoprotein release system ATPase component LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
    
0.913
attE
ABC-type export system ATPase component AttE.
 
    
0.912
cysA
ABC-type sulfate/thiosulfate uptake system ATPase component CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
    
0.908
ftsE
ABC-type cell division-associated export system ATPase component FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
    
0.907
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.