Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
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[Homology]
Score
SO_18184-toluene sulfonate uptake permease family protein. (257 aa)    
Predicted Functional Partners:
SO_1817
Primosomal replication protein N'-like protein.
  
    0.788
dinG
ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase.
       0.783
SO_1815
Histone deacetylase superfamily protein.
  
    0.778
SO_1816
Periplasmic protein of unknown function DUF2057; Belongs to the UPF0319 family.
       0.773
SO_1884
4-toluene sulfonate uptake permease family protein.
  
    0.728
comFB
Late competence development protein ComFB.
       0.727
polB
DNA polymerase II PolB.
       0.510
proS
prolyl-tRNA synthetase ProS; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involve [...]
      0.431
SO_2451
SAM-dependent methyltransferase; Belongs to the methyltransferase superfamily.
  
    0.402
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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