SO_1835 protein (Shewanella oneidensis) - STRING interaction network

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Score

SO_1835

S4 RNA-binding domain protein. (76 aa)

Predicted Functional Partners:

SO_1836

0.731

recF

0.681

rimJ

0.570

yaeQ

0.531

dnaN

0.530

tnpA-40

0.445

SO_0776

0.429

trmB

0.429

SO_3856

0.410

Your Current Organism:

Shewanella oneidensis

NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SO_0776	SO_1835	SO_0776	SO_1835	YecA family protein; Belongs to the UPF0149 family.	S4 RNA-binding domain protein.	0.429
SO_0776	recF	SO_0776	SO_0010	YecA family protein; Belongs to the UPF0149 family.	DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.	0.671
SO_1835	SO_0776	SO_1835	SO_0776	S4 RNA-binding domain protein.	YecA family protein; Belongs to the UPF0149 family.	0.429
SO_1835	SO_1836	SO_1835	SO_1836	S4 RNA-binding domain protein.	Protein of unknown function DUF1260.	0.731
SO_1835	SO_3856	SO_1835	SO_3856	S4 RNA-binding domain protein.	Protein of unknown function DUF3069.	0.410
SO_1835	dnaN	SO_1835	SO_0009	S4 RNA-binding domain protein.	DNA polymerase III beta subunit DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	0.530
SO_1835	recF	SO_1835	SO_0010	S4 RNA-binding domain protein.	DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.	0.681
SO_1835	rimJ	SO_1835	SO_1834	S4 RNA-binding domain protein.	Ribosomal protein S5 p-alanine acetyltransferase RimJ.	0.570
SO_1835	tnpA-40	SO_1835	SO_1833	S4 RNA-binding domain protein.	ISSod7 transposase TnpA_ISSod7.	0.445
SO_1835	trmB	SO_1835	SO_3367	S4 RNA-binding domain protein.	tRNA (guanine-N(7)-)-methyltransferase TrmB; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.429
SO_1835	yaeQ	SO_1835	SO_3107	S4 RNA-binding domain protein.	Protein of unknown function YaeQ.	0.531
SO_1836	SO_1835	SO_1836	SO_1835	Protein of unknown function DUF1260.	S4 RNA-binding domain protein.	0.731
SO_1836	rimJ	SO_1836	SO_1834	Protein of unknown function DUF1260.	Ribosomal protein S5 p-alanine acetyltransferase RimJ.	0.521
SO_1836	tnpA-40	SO_1836	SO_1833	Protein of unknown function DUF1260.	ISSod7 transposase TnpA_ISSod7.	0.410
SO_3856	SO_1835	SO_3856	SO_1835	Protein of unknown function DUF3069.	S4 RNA-binding domain protein.	0.410
dnaN	SO_1835	SO_0009	SO_1835	DNA polymerase III beta subunit DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	S4 RNA-binding domain protein.	0.530
dnaN	recF	SO_0009	SO_0010	DNA polymerase III beta subunit DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.	0.981
recF	SO_0776	SO_0010	SO_0776	DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.	YecA family protein; Belongs to the UPF0149 family.	0.671
recF	SO_1835	SO_0010	SO_1835	DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.	S4 RNA-binding domain protein.	0.681
recF	dnaN	SO_0010	SO_0009	DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.	DNA polymerase III beta subunit DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	0.981

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