Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
exeSExtracellular nuclease ExeS. (948 aa)    
Predicted Functional Partners:
ushA
Bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA; Belongs to the 5'-nucleotidase family.
   
 0.953
SO_2281
Predicted Ca-binding lipoprotein.
   
 0.918
endA
Endonuclease I EndA.
     
 0.867
SO_1942
Cyclic di-GMP hydrolase.
      
 0.830
SO_3491
Cyclic di-GMP hydrolase.
      
 0.830
SO_4711
Cyclic di-GMP hydrolase.
      
 0.830
wbfY
Polysaccharide biosynthesis protein epimerase/dehydratase-like WbfY.
   
  
 0.829
cpdB
Bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3`-nucleotidase CpdB; Belongs to the 5'-nucleotidase family.
     
 0.808
proB
Glutamate 5-kinase ProB; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
      
 0.798
phoX
Monomeric alkaline phosphatase PhoX.
     
 0.681
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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