Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
liuGacetyl-CoA:acetoacetate-CoA transferase beta subunit LiuG. (218 aa)    
Predicted Functional Partners:
liuF
acetyl-CoA:acetoacetate-CoA transferase alpha subunit LiuF.
 0.999
fadB
Aerobic fatty oxidation complex 3-hydroxyacyl-CoA epimerase alpha subunit FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.990
fadJ
Anaerobic fatty oxidation complex alpha subunit FadJ; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.990
liuE
3-hydroxymethylglutaryl-CoA lyase LiuE.
  
 
 0.970
ivdA
3-ketoacyl-CoA thiolase IvdA; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.951
SO_3263
3-oxoacyl-(acyl-carrier-protein) reductase.
  
 0.909
sucA
2-oxoglutarate dehydrogenase complex dehydrogenase E1 component SucA.
   
 
 0.782
accADCB
acetyl-CoA carboxylase multifunctional enzyme AccADCB.
  
 
 0.749
liuD
methylcrotonyl-CoA carboxylase biotin-binding subunit LiuD.
  
 
 0.749
liuC
methylglutaconyl-CoA hydratase LiuC.
  
 0.707
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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