Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tesBacyl-CoA thioesterase II TesB. (288 aa)    
Predicted Functional Partners:
tesA
Multifunctional thioesterase/protease/lysophospholipase L1 TesA.
      
 0.882
ybgC
TolA energy-transducing system-associated acyl-CoA thioesterase YbgC.
     
 0.823
fadH
NADP-dependent 24-dienoyl-CoA reductase FadH.
  
  
 0.816
ybaY
Putative chaperone for general secretion pathway YbaY.
       0.785
fabZ
(3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
      
 0.763
yiiD
Thioesterase domain protein YiiD.
      
 0.758
maeB
NADP-dependent malate dehydrogenase (oxaloacetate-decarboxylating) MaeB.
      
 0.667
puuA
Gamma-glutamyl-putrescine synthase PuuA; Belongs to the glutamine synthetase family.
      
 0.663
trxC
Thioredoxin 2 TrxC; Belongs to the thioredoxin family.
      
 0.661
SO_1911
Oxidoreductase short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.614
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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