Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
hppD4-hydroxyphenylpyruvate dioxygenase HppD. (346 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase HmgA.
 
 0.999
phhA
Phenylalanine-4-hydroxylase PhhA.
 
  
 0.997
aspC
Aspartate aminotransferase AspC.
  
 
 0.988
aspC-2
Aspartate aminotransferase AspC.
  
 
 0.987
maiA
Maleylacetoacetate isomerase MaiA.
 
  
 0.969
fahA
Fumarylacetoacetate hydrolase FahA.
 
  
 0.963
phhB
Pterin-4-alpha-carbinolamine dehydratase PhhB.
  
  
 0.956
hisC
Histidinol-phosphate aminotransferase HisC; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.920
accADCB
acetyl-CoA carboxylase multifunctional enzyme AccADCB.
  
  
 0.849
aguB
N-carbamoyl-putrescine amidase AguB.
  
 
  0.822
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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