STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
cheVChemotaxis signal transduction system response regulator CheV. (314 aa)    
Predicted Functional Partners:
cheA
Chemotaxis signal transduction system histidine kinase CheA.
 0.999
cheA-2
Chemotaxis signal transduction system histidine kinase CheA.
 0.999
SO_0584
Chemotaxis signal transduction system methyl accepting sensory transducer with PAS sensory domain.
 
 0.990
SO_1385
Chemotaxis signal transduction system methyl accepting sensory transducer with PAS sensory domain.
 
 0.990
cheW-4
Chemotaxis signal transduction system adaptor protein CheW.
 
 0.990
cheC
Chemotaxis signal transduction system inhibitor of MCP methylation CheC.
 
 
 0.989
SO_3404
Methyl accepting sensory transducer with PAS sensory domain.
 
 0.988
cheZ
Chemotaxis signal transduction system CheY phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
 
 0.985
SO_4002
Two component signal transduction system hybrid histidine kinase/response regulator with PAS sensory domain.
  
 
 0.981
cheV-2
Chemotaxis signal transduction system response regulator CheV.
 
0.977
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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