dusC protein (Shewanella oneidensis) - STRING interaction network

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dusC

tRNA-dihydrouridine synthase C DusC; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily. (315 aa)

Predicted Functional Partners:

SO_2005

0.621

SO_2007

0.579

ppiC

0.541

SO_2009

0.527

truA

0.526

SO_2008

0.498

trmB

0.476

trmA

0.473

trmD

0.450

fis

0.443

Your Current Organism:

Shewanella oneidensis

NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SO_2005	SO_2009	SO_2005	SO_2009	dksA-type zinc finger protein.	Protein of unknown function DUF2063.	0.404
SO_2005	dusC	SO_2005	SO_2006	dksA-type zinc finger protein.	tRNA-dihydrouridine synthase C DusC; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	0.621
SO_2007	SO_2008	SO_2007	SO_2008	Putative periplasmic low complexity protein.	Protein of unknown function DUF692; Belongs to the UPF0276 family.	0.955
SO_2007	SO_2009	SO_2007	SO_2009	Putative periplasmic low complexity protein.	Protein of unknown function DUF2063.	0.958
SO_2007	dusC	SO_2007	SO_2006	Putative periplasmic low complexity protein.	tRNA-dihydrouridine synthase C DusC; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	0.579
SO_2008	SO_2007	SO_2008	SO_2007	Protein of unknown function DUF692; Belongs to the UPF0276 family.	Putative periplasmic low complexity protein.	0.955
SO_2008	SO_2009	SO_2008	SO_2009	Protein of unknown function DUF692; Belongs to the UPF0276 family.	Protein of unknown function DUF2063.	0.996
SO_2008	dusC	SO_2008	SO_2006	Protein of unknown function DUF692; Belongs to the UPF0276 family.	tRNA-dihydrouridine synthase C DusC; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	0.498
SO_2009	SO_2005	SO_2009	SO_2005	Protein of unknown function DUF2063.	dksA-type zinc finger protein.	0.404
SO_2009	SO_2007	SO_2009	SO_2007	Protein of unknown function DUF2063.	Putative periplasmic low complexity protein.	0.958
SO_2009	SO_2008	SO_2009	SO_2008	Protein of unknown function DUF2063.	Protein of unknown function DUF692; Belongs to the UPF0276 family.	0.996
SO_2009	dusC	SO_2009	SO_2006	Protein of unknown function DUF2063.	tRNA-dihydrouridine synthase C DusC; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	0.527
dusC	SO_2005	SO_2006	SO_2005	tRNA-dihydrouridine synthase C DusC; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	dksA-type zinc finger protein.	0.621
dusC	SO_2007	SO_2006	SO_2007	tRNA-dihydrouridine synthase C DusC; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	Putative periplasmic low complexity protein.	0.579
dusC	SO_2008	SO_2006	SO_2008	tRNA-dihydrouridine synthase C DusC; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	Protein of unknown function DUF692; Belongs to the UPF0276 family.	0.498
dusC	SO_2009	SO_2006	SO_2009	tRNA-dihydrouridine synthase C DusC; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	Protein of unknown function DUF2063.	0.527
dusC	fis	SO_2006	SO_0393	tRNA-dihydrouridine synthase C DusC; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	Global transcriptional activator Fis; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family.	0.443
dusC	ppiC	SO_2006	SO_0635	tRNA-dihydrouridine synthase C DusC; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	Peptidyl-prolyl cis-trans isomerase PpiC.	0.541
dusC	trmA	SO_2006	SO_0206	tRNA-dihydrouridine synthase C DusC; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	tRNA (uracil-5-)-methyltransferase TrmA; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).	0.473
dusC	trmB	SO_2006	SO_3367	tRNA-dihydrouridine synthase C DusC; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.	tRNA (guanine-N(7)-)-methyltransferase TrmB; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.476

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