Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SO_2045Cation efflux protein CDF family. (394 aa)    
Predicted Functional Partners:
SO_2046
Transcriptional regulator MarR family.
  
  
 0.871
SO_1189
Putative periplasmic protein of unknown function DUF2271.
   
  
 0.731
putA
TonB-dependent ferric putrebactin siderophore receptor PutA.
  
  
 0.731
SO_4150
Sulphate transporter.
   
 
 0.705
SO_4712
ABC-type transporter ATPase component.
      
 0.692
SO_1190
Putative periplasmic CbiK superfamily protein.
  
  
 0.677
SO_3063
Cation:alanine/glycine transporter AGCS family.
     
 0.673
wbqC
Putative glycine transferase in O-antigen biosynthesis cluster WbqC.
      
 0.666
grtP
D-glycerate transporter GrtP.
      
 0.663
SO_2280
drug:H+ antiporter DHA1 family.
      
 0.663
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.