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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frmBS-formylglutathione hydrolase FrmB; Serine hydrolase involved in the detoxification of formaldehyde. (279 aa)    
Predicted Functional Partners:
frmA
S-(hydroxymethyl)glutathione dehydrogenase FrmA; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 0.999
SO_0988
Molybdopterin-binding oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
  0.913
fdhA-2
Fnr-inducilble formate dehydrogenase molybdopterin-binding subunit FdhA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.907
fdnG
Nitrate-inducible formate dehydrogenase molybdopterin-binding subunit FdnG; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
  0.900
fdnH
Nitrate-inducible formate dehydrogenase iron-sulfur subunit FdnH; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.
     
  0.900
fdnI
Nitrate-inducible formate dehydrogenase cytochrome b subunit FdnI.
     
  0.900
fdh
Formate dehydrogenase cytochrome b Fdh.
     
  0.900
fdhA
Formate dehydrogenase molybdopterin-binding subunit FdhA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
  0.900
fdhB
Formate dehydrogenase FeS subunit FdhB.
     
  0.900
fdhC
Formate dehydrogenase cytochrome b subunit FdhC.
   
 
  0.900
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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