Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
qseCAI-3-responsive two component signal transduction system histidine kinase QseC. (464 aa)    
Predicted Functional Partners:
qseB
AI-3-responsive two component signal transduction system response regulator QseB.
 
 0.999
kdpE
Two-component system, OmpR family, KDP operon response regulator KdpE; Two component signal transduction system controlling the osmosenstive K+ channel response regulator KdpE.
 
 0.987
SO_4002
Two component signal transduction system hybrid histidine kinase/response regulator with PAS sensory domain.
 
 
 0.914
barA
Histidine kinase; Two component signal transduction system hybrid histidine kinase/response regulator with DUF2222 and Hpt domains BarA.
 
 
 0.891
cpxR
Periplasmic stress-responsive two component signal transduction system response regulator CpxR.
 
 
 0.886
phoB
Phosphate-responsive two component signal transduction system response regulator PhoB.
 
 
 0.878
rstA
Two component signal transduction system controlling curli production response regulator RstA.
 
 
 0.875
phoP
Two component signal transduction system response regulator PhoP.
 
 
 0.843
SO_0622
Two component signal transduction system response regulator.
 
 
 0.822
SO_2426
Two component signal transduction system response regulator.
 
 
 0.820
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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