Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yejLProtein of unknown function DUF1414 YejL; Belongs to the UPF0352 family. (72 aa)    
Predicted Functional Partners:
yejM
Putative sulftase with DUF3413 domain YejM.
 
  
 0.892
ndpA
Nucleoid-associated protein NdpA.
 
  
 0.890
slyX
Functionally uncharacterized protein SlyX; Belongs to the SlyX family.
  
   
 0.876
SO_2669
Mu phage protein of unknown function.
   
  
 0.858
SO_4134
Protein of unknown function DUF465.
      
 0.851
SO_4657
Diguanylate cyclase/phosphodiesterase with PAS and LOV sensory domains and Chase small molecule binding site.
      
 0.809
SO_2063
Outer membrane lipoprotein.
      
 0.805
SO_4422
TonB-dependent ferric achromobactin receptor.
      
 0.801
zapB
Septal ring assembly factor ZapB; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.
      
 0.790
rraB
Ribonuclease E inhibitor RraB; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome.
  
    0.786
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.