STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
algAAlpha-glucosidase AlgA. (540 aa)    
Predicted Functional Partners:
malQ
4-alpha-glucanotransferase MalQ.
  
 
 0.946
susB
Alpha-glucosidase SusB.
 
  
 0.934
cga
Glucan 14-alpha-glucosidase Cga.
    
 0.922
hexA
D-hexose 6-phosphotransferase HexA.
  
 
 0.912
ptsG
Phosphotransferase system (PTS) glucose-specific IIBC component PtsG.
  
  
 0.757
glgA
Glycogen synthase ADP-glucose transglucosylase GlgA.
 
  
 0.631
malR
Transcriptional repressor of maltodextrose utilization MalR.
 
  
 0.627
glgX
Glycogen isoamylase GlgX; Belongs to the glycosyl hydrolase 13 family.
 
  
0.594
malT
Putative maltose transporter MalT.
 
  
 0.590
gltB
NADPH-dependent glutamate synthase large subunit GltB.
     
 0.587
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.