Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
malRTranscriptional repressor of maltodextrose utilization MalR. (346 aa)    
Predicted Functional Partners:
SO_4705
Transcriptional repressor Xre family.
      
 0.970
gltB
NADPH-dependent glutamate synthase large subunit GltB.
    
 
 0.884
sdaR
Transcriptional repressor of glycerate utilization SdaR.
      
 0.861
puuR
Putrescine degradation gene regulator PuuR.
     
 0.795
malT
Putative maltose transporter MalT.
 
  
 0.766
ptsH
Phosphotransferase system (PTS) phosphocarrier protein HPr PtsH.
   
 
 0.726
ptsO
Phosphotransferase system (PTS) phosphohisitinoprotein-hexose phosphotransferase comonent PtsO.
   
 
 0.726
SO_3513
Flavin-dependent tryptophan halogenase.
  
     0.716
susB
Alpha-glucosidase SusB.
  
     0.715
SO_4002
Two component signal transduction system hybrid histidine kinase/response regulator with PAS sensory domain.
  
 
 0.689
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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