Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
SO_2256Uncharacterized protein. (206 aa)    
Predicted Functional Partners:
fliS
Chaperone for FliC flagellin FliS.
  
  
 0.837
fliD
Flagellar filament capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.811
flgN
Secretion chaperone for FlgK and FlgL FlgN.
  
  
 0.704
pomB
Stator-force generator of Na+ coupled flagellar motor PomB.
  
 
 0.689
flgK
Flagellar hook-filament junction protein FlgK; Belongs to the flagella basal body rod proteins family.
  
  
 0.686
flgM
Flagellar biosynthesis anti-sigma factor FlgM.
  
  
 0.670
SO_2254
Periplasmic protein of unknown function DUF2803.
       0.666
mfd
Transcription-repair coupling factor Mfd; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
       0.666
cheV
Chemotaxis signal transduction system response regulator CheV.
  
  
 0.635
cheV-2
Chemotaxis signal transduction system response regulator CheV.
  
  
 0.635
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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