STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_2297Uncharacterized protein. (66 aa)    
Predicted Functional Partners:
priB
Primosomal replication protein N PriB; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.
  
     0.594
SO_3722
Protein of unknown function DUF2806.
  
    0.561
ampE
AmpD signaling modulator AmpE.
  
    0.557
SO_3200
Putative membrane anchored protein of unknown function DUF2802.
  
    0.537
mshN
MSHA biogenesis protein MshN.
 
     0.520
SO_1175
Protein of unknown function DUF1451.
  
    0.511
SO_4011
Protein of unknown function DUF3581.
  
     0.500
SO_0132
Periplasmic FliL-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
    0.470
SO_2557
TIGR03503 family protein.
  
     0.464
flgM
Flagellar biosynthesis anti-sigma factor FlgM.
  
    0.432
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.