STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoXMonomeric alkaline phosphatase PhoX. (685 aa)    
Predicted Functional Partners:
phoD
Ca(2+)-dependent phospholipase D PhoD.
 
  
 0.922
cpdB
Bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3`-nucleotidase CpdB; Belongs to the 5'-nucleotidase family.
  
  
 0.908
phoA
Periplasmic alkaline phosphatase PhoA; Belongs to the alkaline phosphatase family.
  
  
 0.907
ushA
Bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA; Belongs to the 5'-nucleotidase family.
 
  
 0.830
phoU
Transcriptional regulator of high affinity phosphate uptake system PhoU; Plays a role in the regulation of phosphate uptake.
  
  
 0.810
exeS
Extracellular nuclease ExeS.
     
 0.769
endA
Endonuclease I EndA.
  
  
 0.734
phoB
Phosphate-responsive two component signal transduction system response regulator PhoB.
      
 0.607
dsbI
Disulfide bond formation protein DsbB family; Required for disulfide bond formation in some proteins. Part of a redox system composed of DsbI and DsbL that mediates formation of an essential disulfide bond in AssT (By similarity).
   
  
 0.597
nupC
Na-dependent nicotinamide ribose transporter NupC.
      
 0.570
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.