STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ampCClass C beta-lactamase AmpC. (401 aa)    
Predicted Functional Partners:
blaA
Class D carbapenem-hydrolyzing beta-lactamase BlaA.
     
 0.922
ampD
N-acetyl-anhydromuramyl-L-alanine amidase AmpD.
      
 0.918
ampG
GlcNAc-anhMurNAc permease AmpG.
      
 0.915
nagZ
beta-N-acetylglucosaminidase NagZ; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
  
  
 0.876
SO_0914
Beta lactamase family protein.
  
   
 0.822
dgkA
Diacylglycerol kinase DgkA; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
      
 0.822
SO_3054
Metallo-beta-lactamase family protein.
      
 0.757
SO_3474
Metallo-beta-lactamase family protein.
   
  
 0.750
folP
Dihydropteroate synthase FolP; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
   
  
 0.742
SO_0541
RNA-metabolizing metallo-beta-lactamase family protein.
      
 0.733
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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