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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malTPutative maltose transporter MalT. (529 aa)    
Predicted Functional Partners:
malR
Transcriptional repressor of maltodextrose utilization MalR.
 
  
 0.771
susB
Alpha-glucosidase SusB.
 
     0.752
nagR
Transcriptional repressor of N-acetylglucosamine utilization NagR.
 
   
 0.718
SO_3513
Flavin-dependent tryptophan halogenase.
 
    0.715
SO_3514
TonB-dependent chitooligosaccharide receptor.
 
  
 0.691
cga
Glucan 14-alpha-glucosidase Cga.
 
  
 0.668
SO_2156
O-glycosyl hydrolase family 13.
 
  
 0.611
nagP
N-acetyl glucosamine transporter NagP.
 
  
 0.575
algA
Alpha-glucosidase AlgA.
 
  
 0.529
SO_4543
Putative alpha-dextrin endo-1 6-alpha-glucosidase.
  
    0.522
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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