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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SO_2539Two component signal transduction system response regulator with cyclic diguanylate phosphodiesterase activity and PAS sensory domain. (658 aa)    
Predicted Functional Partners:
SO_2543
Two component signal transduction system histidine kinase.
  
 
 0.982
SO_1055
Diguanylate cyclase with PAS and GAF sensory domains.
 
 0.977
SO_3759
Diguanylate cyclase with GAF sensory domain.
  
 0.970
SO_2144
NO-binding heme-dependent sensor protein.
   
  
 0.960
SO_2544
Two component signal transduction system hybrid histidine kinase/response regulator with Hpt domain.
 
 
 0.948
SO_2145
Two component signal transduction system histidine kinase.
  
 
 0.945
SO_0928
Diguanylate cyclase.
  
 0.930
SO_1646
Diguanylate cyclase.
  
 0.888
SO_2174
Diguanylate cyclase with PAS sensory domain.
  
 0.867
SO_3556
Diguanylate cyclase with GAF sensory domain.
 
  
 0.865
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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