STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheC-2Chemotaxis signal transduction system inhibitor of MCP methylation CheC. (190 aa)    
Predicted Functional Partners:
cheD
Chemotaxis signal transduction system chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
 0.988
cheD2
Chemotaxis signal transduction system chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
 0.987
cheY-3
Chemotaxis signal transduction system response regulator CheY.
 
  
 0.942
cheV
Chemotaxis signal transduction system response regulator CheV.
 
  
 0.939
cheV-2
Chemotaxis signal transduction system response regulator CheV.
 
  
 0.936
cheY-4
Chemotaxis signal transduction system response regulator CheY.
  
 
 0.923
cheV-3
Chemotaxis signal transduction system response regulator CheV.
 
  
 0.923
cheY
Chemotaxis signal transduction system response regulator CheY.
  
 
  0.917
cheY-2
Chemotaxis signal transduction system response regulator CheY.
  
  
  0.913
cheA-2
Chemotaxis signal transduction system histidine kinase CheA.
 
 
 0.913
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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