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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheY-3Chemotaxis signal transduction system response regulator CheY. (121 aa)    
Predicted Functional Partners:
SO_2545
Two component signal transduction system histidine kinase with PAS sensory domain.
 
 
 
 0.975
cheC-2
Chemotaxis signal transduction system inhibitor of MCP methylation CheC.
 
  
 0.939
SO_2544
Two component signal transduction system hybrid histidine kinase/response regulator with Hpt domain.
 
 
 0.902
cheA-2
Chemotaxis signal transduction system histidine kinase CheA.
 
 
 0.831
cheY-4
Chemotaxis signal transduction system response regulator CheY.
  
 
 0.807
fliM
Flagellar motor switching and energizing component FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
  
 0.807
SO_0545
Two component signal transduction system response regulator with diguanylate cyclase/phosphodiesterase acitivity.
   
 
 0.768
mxdA
Diguanylate cyclase-like protein MxdA.
  
 
 0.760
barA
Histidine kinase; Two component signal transduction system hybrid histidine kinase/response regulator with DUF2222 and Hpt domains BarA.
 
 
 0.728
cheR-3
Chemotaxis signal transduction system MCP methyltransferase CheR.
 
  
 0.718
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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