Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cheY-3Chemotaxis signal transduction system response regulator CheY. (121 aa)    
Predicted Functional Partners:
SO_2545
Two component signal transduction system histidine kinase with PAS sensory domain.
 
 
 
 0.974
cheC-2
Chemotaxis signal transduction system inhibitor of MCP methylation CheC.
 
  
 0.942
SO_2544
Two component signal transduction system hybrid histidine kinase/response regulator with Hpt domain.
 
 
 0.934
cheY-4
Chemotaxis signal transduction system response regulator CheY.
   
 
 0.846
SO_0545
Two component signal transduction system response regulator with diguanylate cyclase/phosphodiesterase acitivity.
  
 
 0.803
mxdA
Diguanylate cyclase-like protein MxdA.
   
 
 0.796
cheA-2
Chemotaxis signal transduction system histidine kinase CheA.
 
 
 0.788
fliM
Flagellar motor switching and energizing component FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
  
 0.780
cheD2
Chemotaxis signal transduction system chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
  
  
 0.761
barA
Histidine kinase; Two component signal transduction system hybrid histidine kinase/response regulator with DUF2222 and Hpt domains BarA.
 
 
 0.748
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.