| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SO_0886 | cspD | SO_0886 | SO_2628 | Putative metal-binding protein of unknown function DUF2387. | DNA-binding cold shock protein CspD. | 0.750 |
| SO_0886 | rpmC | SO_0886 | SO_0239 | Putative metal-binding protein of unknown function DUF2387. | 50S ribosomal protein L29 RpmC; Belongs to the universal ribosomal protein uL29 family. | 0.478 |
| clpS | cspD | SO_2627 | SO_2628 | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | DNA-binding cold shock protein CspD. | 0.584 |
| cspD | SO_0886 | SO_2628 | SO_0886 | DNA-binding cold shock protein CspD. | Putative metal-binding protein of unknown function DUF2387. | 0.750 |
| cspD | clpS | SO_2628 | SO_2627 | DNA-binding cold shock protein CspD. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.584 |
| cspD | deaD | SO_2628 | SO_4034 | DNA-binding cold shock protein CspD. | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.848 |
| cspD | ptsN | SO_2628 | SO_3963 | DNA-binding cold shock protein CspD. | Phosphotransferase system (PTS) sugar-specific IIA component PtsN. | 0.562 |
| cspD | rplW | SO_2628 | SO_0233 | DNA-binding cold shock protein CspD. | 50S ribosomal protein L23 RplW; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.531 |
| cspD | rpmC | SO_2628 | SO_0239 | DNA-binding cold shock protein CspD. | 50S ribosomal protein L29 RpmC; Belongs to the universal ribosomal protein uL29 family. | 0.541 |
| cspD | rpmE | SO_2628 | SO_4120 | DNA-binding cold shock protein CspD. | 50S ribosomal protein L31 RpmE; Binds the 23S rRNA. | 0.671 |
| cspD | rpsL | SO_2628 | SO_0226 | DNA-binding cold shock protein CspD. | 30S ribosomal protein S12p RpsL; With S4 and S5 plays an important role in translational accuracy. | 0.581 |
| cspD | rpsQ | SO_2628 | SO_0240 | DNA-binding cold shock protein CspD. | 30S ribosomal protein S17 RpsQ; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.572 |
| cspD | rpsS | SO_2628 | SO_0235 | DNA-binding cold shock protein CspD. | 30S ribosomal protein S19 RpsS; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.545 |
| deaD | cspD | SO_4034 | SO_2628 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | DNA-binding cold shock protein CspD. | 0.848 |
| deaD | rplW | SO_4034 | SO_0233 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 50S ribosomal protein L23 RplW; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.432 |
| ptsN | cspD | SO_3963 | SO_2628 | Phosphotransferase system (PTS) sugar-specific IIA component PtsN. | DNA-binding cold shock protein CspD. | 0.562 |
| rplW | cspD | SO_0233 | SO_2628 | 50S ribosomal protein L23 RplW; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | DNA-binding cold shock protein CspD. | 0.531 |
| rplW | deaD | SO_0233 | SO_4034 | 50S ribosomal protein L23 RplW; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.432 |
| rplW | rpmC | SO_0233 | SO_0239 | 50S ribosomal protein L23 RplW; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 50S ribosomal protein L29 RpmC; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
| rplW | rpmE | SO_0233 | SO_4120 | 50S ribosomal protein L23 RplW; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 50S ribosomal protein L31 RpmE; Binds the 23S rRNA. | 0.958 |
